MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Proteus mirabilis
19428wB5_irhom_Sw
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 61
bases: 3,945,692 bps
CDS: 3,505
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,596
Total number of protein coding genes annotated/found:
3,505
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5038|JADGLF010000010.1
SEQF5038_00004
Genome Viewer
NA
AA
825/275
1605-781
HTH-type transcriptional regulator HdfR
SEQF5038|JADGLF010000010.1
SEQF5038_00005
Genome Viewer
NA
AA
339/113
1721-2059
hypothetical protein
SEQF5038|JADGLF010000010.1
SEQF5038_00006
Genome Viewer
NA
AA
1533/511
3639-2107
Competence protein ComM
SEQF5038|JADGLF010000010.1
SEQF5038_00007
Genome Viewer
NA
AA
1650/550
4315-5964
Acetolactate synthase isozyme 2 large subunit
SEQF5038|JADGLF010000010.1
SEQF5038_00008
Genome Viewer
NA
AA
279/93
5961-6239
Acetolactate synthase isozyme 2 small subunit
SEQF5038|JADGLF010000010.1
SEQF5038_00009
Genome Viewer
NA
AA
927/309
6250-7176
Branched-chain-amino-acid aminotransferase
SEQF5038|JADGLF010000010.1
SEQF5038_00010
Genome Viewer
NA
AA
1851/617
7249-9099
Dihydroxy-acid dehydratase
SEQF5038|JADGLF010000010.1
SEQF5038_00011
Genome Viewer
NA
AA
1575/525
9103-10677
L-threonine dehydratase biosynthetic IlvA
SEQF5038|JADGLF010000010.1
SEQF5038_00012
Genome Viewer
NA
AA
888/296
11550-10663
HTH-type transcriptional regulator HdfR
SEQF5038|JADGLF010000010.1
SEQF5038_00013
Genome Viewer
NA
AA
1476/492
11723-13198
Ketol-acid reductoisomerase (NADP(+))
SEQF5038|JADGLF010000010.1
SEQF5038_00014
Genome Viewer
NA
AA
270/90
13726-13457
mRNA interferase toxin YafQ
SEQF5038|JADGLF010000010.1
SEQF5038_00015
Genome Viewer
NA
AA
249/83
13975-13727
hypothetical protein
SEQF5038|JADGLF010000010.1
SEQF5038_00016
Genome Viewer
NA
AA
2022/674
14149-16170
ATP-dependent DNA helicase Rep
SEQF5038|JADGLF010000010.1
SEQF5038_00017
Genome Viewer
NA
AA
1509/503
17753-16245
Guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase
SEQF5038|JADGLF010000010.1
SEQF5038_00018
Genome Viewer
NA
AA
1299/433
19055-17757
ATP-dependent RNA helicase RhlB
SEQF5038|JADGLF010000010.1
SEQF5038_00019
Genome Viewer
NA
AA
327/109
19175-19501
Thioredoxin 1
SEQF5038|JADGLF010000010.1
SEQF5038_00020
Genome Viewer
NA
AA
1260/420
20064-21323
Transcription termination factor Rho
SEQF5038|JADGLF010000010.1
SEQF5038_00021
Genome Viewer
NA
AA
1077/359
21733-22809
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase
SEQF5038|JADGLF010000010.1
SEQF5038_00022
Genome Viewer
NA
AA
1059/353
22833-23891
ECA polysaccharide chain length modulation protein
SEQF5038|JADGLF010000010.1
SEQF5038_00023
Genome Viewer
NA
AA
1131/377
24021-25151
UDP-N-acetylglucosamine 2-epimerase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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